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Natural Prodcast Episode 24: Jackie Winter and SMC
… Metabolism Collaboratory data portal I’ve been working on with my colleagues Drew Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … notes at naturalprodcast.com — I went a little overboard with links on this, since I’m hoping this episode and the …
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How to Submit Sequencing Samples
… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … have any questions, please contact your Project Manager or jgi[email protected] . … prior to shipment to the  JGI. The documents below (posted with permission) demonstrate the importance of proper …
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Community Science Program
… Program (CSP) provides the scientific community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … call is for expansive projects that leverage a range of JGI capabilities, and also requires a Letter of Intent. The …
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Natural Prodcast Episode 5: Brad Moore
… lucky to get some time to sit down and have a great chat with him.  I kind of lost count of how many times Brad used … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … a new organism in the lab, the new challenges there. We collaborated with a group at the J. Craig Venter Institute, …
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Natural Prodcast Episode 2: The Primer, Part 2
… 2 of our “primer” episode, so if you ended up here somehow without having listened to the first part, you might be a … have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … in plants, fungi, and microorganisms. If you want to collaborate, let us know!  Thanks, and see you next time!  …
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Data Policy & Support
… Data Management at the JGI … JGI Scientist Code of Conduct …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last … Users were previously limited to accessing data sets within groups, such as plants (via Phytozome) or fungi ( … are currently limited to: Public data: datasets associated with completed projects that are eligible for public …
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Webinar: SIP technologies at EMSL and JGI
… Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that leverage … EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, NanoSIMS, … so you’d need at least 2 micrograms in the sample to start with. 2. Q: What would a typical turnaround time be for data …
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Natural Prodcast Episode 1: The Primer, Part 1
… for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at … metabolism – field, though, is real, and it’s a field with very real and truly amazing science with a long … in plants, fungi, and microorganisms. If you want to collaborate, let us know! Find out more at …
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Natural Prodcast Episode 9: Roger Linington
… in making this happen. We had a really fun conversation with Roger about all this, in terms of how to build an … let me know! I’m dying to hear from you. Toss an email to  jgi[email protected] , or leave us a review on Apple Podcasts … in plants, fungi, and microorganisms. If you want to collaborate, let us know! Find out more at  …
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JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in New … research and tips for submitting successful proposals: Collaborate With a U.S. DOE User Facility: Learn About Available …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … to energy independence in the U.S. Not only does it pair with maize, the dominant source of bioethanol, in crop … “I love working with these guys,” said Duplessis, who has collaborated with the JGI on multiple projects involving …
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