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…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial … In the ocean’s North Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But … to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced community genomes …
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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Effects of Polar Light Cycle on Microbial Food Web
… the natural world. The Impact From the polar regions to the deep ocean, cold environments occupy more space on Earth than any other … Therefore, understanding the microbial activity that dominates these polar environments greatly contributes to … work was supported by the Australian Research Council (DP150100244) and the Australian Antarctic Science program …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… conifer needle microbiomes. The survey showed what these microbes are equipped to do on the leaf surface. More … of conifer needle microbiomes across six sites spanning a 1000km section of the Rocky Mountains. This represents the … The team learned that some bacterial families carry genes for degrading monoterpenes such as α-pinene, as well …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… Streptomyces are nature's chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay … users can leverage to create a more complete picture of how microbes control useful chemistry in other organisms.  … Summary Most Streptomyces species can produce roughly 30 secondary metabolites — chemical compounds not required …
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Secondary Metabolites Program
… conditions, with only a small portion of the biosynthetic gene clusters (BGCs) being expressed. The program works to … uncover these hidden biochemical resources by exploring the genetic pathways responsible for their synthesis. The … developing computational tools for predicting biosynthetic gene clusters (BGCs), advancing pathway analysis, …
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Natural Prodcast Episode 18: A CSP Primer
… I think for Natural Prodcast, I think the question that generally comes up that people come to me asking like is– … genome program. And I’m a scientist here. And have been for 18 years. (LAUGHS) DAN UDWARY: All right. Easy start. What … where smaller proposals may be a fit. Still not 20 many microbes. We still we work in plates, right? We’re a high …
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Natural Prodcast Episode 9: Roger Linington
… America brought to the UK? ROGER:  Yeah, it’s difficult to generalize, of course, but I felt overall that the British … about the topic we cared about. And that gave us about 12,000 molecules. And that was enough for us to build a … my perspective, JGI has a large database of biosynthetic gene clusters and biosynthetic gene cluster fragments, and …
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Abundant Atribacteria in deep marine sediment from the Adélie Basin, Antarctica
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms … have many questions about the microbial communities deep underground, and before the pandemic, they took the JGI … National Laboratory. Letters of Intent are due March 16, 2022 to freely access resources at multiple DOE user …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… and analysis. This way, JGI users — both primary, data-generating users, as well as secondary, data-downloading … for a time-series experiment from the highly-studied Lake Mendota is told as part of a three-part series of our  … ecologist and JGI user Trina McMahon has been sampling microbes at Lake Mendota, which borders the University of …
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