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Natural Prodcast Episode 9: Roger Linington
… that city is where I first met Roger, when we were both postdocs at Scripps Institution of Oceanography. Roger was … let me know! I’m dying to hear from you. Toss an email to  jgi[email protected] , or leave us a review on Apple Podcasts … And that’s been followed by developments in pulse sequences and improvements in the ways in which you acquire …
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CSP Large Scale Call
… that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All proposals … and track record of the applicant. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced …
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UC Merced Interns Reflect on Their JGI Summer Projects
… past summer, 10 students from UC Merced worked closely with JGI scientists on research projects that contribute to the … about their work here in a series of videos produced by JGI Communications & Outreach intern Ashleigh Papp. The … for mentors and students alike. Tools like Slack, Google Docs, and GitHub enabled virtual collaboration. JGI also …
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Natural Prodcast Episode 6: Marc Chevrette
… describe. [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s … be fun to be able to provide a semi-regular forum for postdocs and graduate students through Natural Prodcast, … at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a … potentially for like undergrads, grad students, postdocs, for trainees sort of like we do with GNPS, the Global …
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FICUS-NERSC/KBASE
… expand upon highly successful past collaborations, the DOE JGI, NERSC and KBase issued a call for proposals in … as part of the FICUS initiative. Proposals submitted to the JGI-NERSC-KBase call do not use the Letter of Intent; rather … review cycle. All proposals undergo technical review by JGI staff as well as staff at the other participating …
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Natural Prodcast Episode 12: Nadine Ziemert
… was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE ZIEMERT: Yes. … it worked pretty well. DAN UDWARY: No, they were very high quality. Yeah, for sure. NADINE ZIEMERT: Yeah, Dan… it’s a … as viewed through metagenome studies, and what more JGI and others can do to enable progress in this area of …
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CSP Functional Genomics
… function.  The emphasis is on projects leveraging JGI’s DNA synthesis and ‘omics capabilities to enhance … without the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at … form and are reviewed annually. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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JGI Workshops at PAG
… the length and breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, is rising. The purpose of this … we will present current and ongoing developments at the JGI and KBase toward integrative biology and hear from …
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Quality MAGnified
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CSP New Investigator Call
… is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any … the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed 3 Tb in total. Proposals …
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