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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… springs, an extreme environment with low genetic diversity that would help narrow down potential sources of … which is a much less biased approach to studying nature. That’s the real power of metagenomics,” Hatzenpichler said. “It’s great to collaborate with the JGI because with that, we have a much less biased view into biological …
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Virulence of banana wilt-causing fungal pathogen Fusarium oxysporum tropical race 4 is mediated by nitric oxide biosynthesis and accessory genes
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Mike Sneddon
… compute platforms and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging … data platform at Zymergen, a synthetic biology company that went public and was later acquired by Ginkgo Bioworks. …
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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Katherine Louie
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Axel Visel
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Dispatches From JGI Interns
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JGI@25: Studying Sorghum’s Survival Skills
… in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. … 107 patent applications, and 53 patents have cited that genome. Since publishing that original reference …
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The Mobilome in the Mire
…   For years, researchers have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, that can move between organisms. But now, deep sequencing …
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Nigel Mouncey
… Mouncey has a long-standing interest in microbial genetics that started with his education and carried forward into his … During his time in industry, Dr. Mouncey directed R&D teams that focused on the discovery, development and … technologies, capabilities at a scale and a complexity that would be very hard for an individual institution to be …
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Jeremy Schmutz
… the pipelines for directed finishing and co-led the team that finished the DOE human chromosomes 5, 16, and 19. …
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Defining a Pan-Genome for Antarctic Archaea
… in Antarctic lakes, some of which have salinities 10 times that of seawater. To shed light on the global biogeography … occur in response to viral infections and are important for virus-host interactions. Analysis of strain variation showed … of the strain variation appeared related to defense against viruses. Experiments infecting H. lacusprofundi with an …
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