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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science … factors and even other organisms can fuel a deeper understanding of these transcriptional regulatory networks. … This work was supported by the U.S. Department of Energy Office of …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing alga into a powerful … Research (BER) program to advance a fundamental understanding of genome biology, and develop genome-scale … This work was supported by the Department of Energy (DOE) Office of …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single drop … may in turn impact the host communities and their roles in carbon and other nutrient cycles. “This is the first study … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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JGI User Executive Committee Expands
… Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department of Energy … is a fungal evolutionary ecologist with interests in understanding which processes change biodiversity, and how …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… Sequencing technology has changed dramatically over the last  25-plus years since the JGI’s inception, making … models of global climate. They may also provide a basic understanding of the roles microbiomes play in determining … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… Scientists have discovered that the candidate bioenergy feedstock switchgrass has … potential for habitat restoration and as a feedstock for biomass-based biofuel production. As seen with many commonly … loss, compared to the process used by most plant species.) Understanding how the interplay between gene flow, …
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Scaling Up Existing Skill Sets
… Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC … in research and JGI has been the perfect experience in understanding the requirements and responsibilities of being …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … journal Science . This provided a framework essential to understanding how these plant pathogens cause disease and … Publication: Tyler BM et al. Phytophthora genome sequences uncover …
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay …   “This summer internship has broadened my skills and understandings in the field of genomics. This has reinforced …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field … much to learn, I certainly feel much more advanced in my understandings than I would be at this stage without the …
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