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… with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging molecular biology and reverse genetics to test those hypotheses. From 2011 – 2015, she worked with … National Research Service Award (NRSA) Individual Postdoctoral Fellow, expanding her experimental repertoire to …

… University Tübingen (Germany), Dr. Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. … position in 2007, she switched gears from metagenomics to single-cell genomics, which is now her primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and …

… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical … JGI, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial … at University of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis …

… that showcase our collaborations and capabilities to enable great science that will help solve energy and … amount of biomass which could then be converted into sustainable biofuels . For its importance to the DOE … advanced, assembly and annotation of the genome sequence improved in parallel. The switchgrass genome sequence is …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel … User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), to fill in these gaps of knowledge. In … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

… in the Methodology section as “those that rank in the top 1% by citations for papers published and cited between … more of 21 fields appear on the 2019 list. Congratulations to: Project Manager Kerrie Barry, Cross-Field Category … Theobroma cacao, the tree that produces cacao beans. The improved cacao genome is available on the latest version of …

… Microbiology has developed, tested and deployed a pipeline to first target cells from communities of uncultivated … a more targeted genomic approach would allow researchers to focus on specific microbes within metagenome samples and … development, and researchers found that ethanol treatment improved fluorescence signals without hampering subsequent …

… the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research … requires ~ 1.5-10 ㎍. Low-input protocols are continuously improved, but currently require input in the ~ 30 – 100ng …

… regulation determines when and where genes are activated to sustain life’s processes.  Traditionally, mapping this intricate network of regulatory “switches” in plants at a large scale was akin to … and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification Sequencing …

… Trained on environmental data, a new JGI tool more accurately facilitates microbial genome … GenomeOcean, a powerful generative model  now available to the global research community able to not just … enhanced neural network architecture, GenomeOcean has shown improved computational efficiency of its modeling in the …

… the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and microfluidics at the … operationalizing new genomic technologies, integrating automated liquid handling and bioinformatics pipelines to transition bench-scale methods into production workflows. …

… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became … for community sequencing projects and heads R&D efforts to expand the metabolomics capabilities and product … mass spectrometry research products such as stable isotope probing (SIP) to assess metabolite turnover, DNA-SIP …