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Steven Wilson
… Systems Engineering Group lead.   The group is responsible for developing and supporting applications that span the lifecycle of … Manager for the planning and implementation of JGI’s Integrated Tracking System (ITS) and served as the Shared … BS in BioEngineering, University of California, Berkeley …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in … studies in the same system. With the right functional characterization, those genes could become dials for tuning …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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A Step Toward Controlling Soybean Rust
… The United States  is the world’s leading soybean producer , and soybeans are used to produce biodiesel. The fungus  … , Sebastien Duplessis of the French National Institute for Agricultural Research (INRA)  proposed sequencing a … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding … cycles, and possibly cold-temperature enzymes for biotechnological use. Summary Conditions such as extreme … The genome and metagenome data are available through JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) platform. …
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Boosting Small Molecule Production in Super “Soup”
… have both the machinery to make products such as proteins, and the mechanisms for maintenance to keep processes running smoothly. As … Director Nigel Mouncey . Hal Alper will be speaking on “An Integrated Cell / Cell-free Metabolic Engineering Approach … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Viruses Reprogram Cells into Different Virocells
… reprogramming. The Science If it looks like a duck and quacks like a duck, so the adage goes, it must be a … it no longer looks or quacks like one, is it still a duck? For a team led by researchers from The Ohio State University … opportunity to combine the power of genomics and molecular characterization offered at multiple user facilities …
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The More the Merrier: Making the Case for Plant Pan-genomes
… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with … also known as “polyploidy,” is common among flowering plants; at least once during their evolution, the genomes of … Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … In 2009, researchers at the JGI and the Bigelow Laboratory for Ocean Sciences described a novel technique to access … to move from cataloging microbial diversity to experimental characterization and validation of the functional potential …
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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a … of tools that leverage stable isotopes to measure carbon and nutrient flux, and identify microbes assimilating … from the Webinar: 1. Q(uestion): How much DNA is required for the JGI SIP metagenomics pipeline? A(nswer):  The more …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… eye, microscopy reveals unexpected complexity At first glance, the slightly murky waters in the tube look like a … National Laboratory (Berkeley Lab) and the Laboratory for Research in Complex Systems (LRC) in Menlo Park, Calif. … Moore Foundation. “We look forward to learning how the characterization of Ca. Thiomargarita magnifica challenges …
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