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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass Miscanthus sinensis has been … Department of Energy (DOE) Bioenergy Research Center, along with researchers from the Energy Biosciences Institute, the …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for … found inside mitochondria, the energy-producing structures within cells. This is the largest dataset of its kind ever …
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Party in the Rhizosphere
… Jennifer Pett-Ridge of Lawrence Livermore National Laboratory has your backstage pass. …
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Mike Sneddon
… annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for … and AI for large-scale genomics and lab informatics. Prior to joining JGI in late 2025, he served as Director of Scientific Computing at Predicine, an NGS-based …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida … evokes images of fanboats skimming over swamps, while alligators peer through the waters and clouds of insects hover … encompass a wide range of ecosystems ranging from wetlands to tree islands to cattails. In 2018, the US Department of …
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Steven Wilson
… review, project and work order creation and management, automated sequence quality control and automation of microbial/metagenomic assemblies, portals that … Wilson brings a user-centered approach, an ability to work with others to break down complex issues into achievable …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… link in the evolution and transition of fungi from aquatic to terrestrial habitats. The work is part of the JGI’s 1000 … Olpidium attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene … root. Upon maturity, the cucumber roots were rinsed with cold water to stimulate the release of zoospores by Olpidium …
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Alabama A&M Interns Access An Abundance of Knowledge
… and Alabama A&M University piloted an internship program to bring students to the JGI for research training experience. Enabled by the … Ti’Yanna Watson and graduate student LaMonika Dent worked with JGI mentors Yi Zhai and John Vogel on researching the …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… researchers described how the viruses repeatedly attempted to infect and destroy the host archaea – and how the  … and dominant populations in oxygen-poor environments without oxygen deep below ground. These archaea fix carbon … the behavior of a particular candidate virus under a microscope. The viruses were adsorbed by the cells, which then …
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Better Genome Editing for Bioenergy
… team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The … engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it to the correct sequence to snip — … of researchers sought to disrupt every gene in the genome with CRISPR-Cas9 in order to interrogate each one’s …
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SPRUCE-ing Up Science
… is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in his backyard in … Oak Ridge, Tennessee. Recently, Lawrence, in collaboration with researchers from ORNL, Lawrence Berkeley National … project involved developing an algorithm and although the scope of work was established before he began, Lawrence …
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New Research Sheds Light on Diversity in the Deep Sea
… crust that emit hot, mineral-rich water. These vents are too deep in the sea to get any sunlight, and yet they still support a unique … seeps through cracks in the Earth’s crust and reacts with very hot rocks below, becoming an extremely hot, … Foundation grants OCE-0728391, OCE-0937404, OCE-1558795 to A-L.R, and OCE-2049478 and DBI-2047598 to K.A. We thank …
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