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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of methanogenesis, with metagenomic support from the JGI. First they were able to identify the potential for …
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A Community Resource for Secondary Metabolite Researchers
… compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a set of … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. That portal contained …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in Mycology . This work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved …
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … at the JGI Annual Genomics of Energy & Environment Meeting on September 1, 2021. Register here to hear him and …
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Picking Up Threads of Cotton Genomics
… time, the cotton fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Nature Genetics include Jane Grimwood and Jeremy Schmutz of JGI’s  Plant Program , both faculty investigators at the …
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Triggering Morel Fruiting
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are acquired from an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide …
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Eelgrass Proves to Be Much Younger Than We Thought
Recent study shows eelgrass has been around about 2.5 million years less … originated in Japan before spreading around the globe. Now, scientists have shed light on both when and how eelgrass … from the China Scholarship Council to L.Y. (number 201704910807), by a fellowship to M.K. in the Helmholtz …
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Extracting the Secrets of Secondary Metabolites
… secondary metabolites, those molecules not essential for growth yet essential for survival, may now be easier to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … CRISPR to knock out or activate genes, researchers at the JGI were able to monitor loss- and gain-of-function. The …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
As warm-adapted microbes edge polewards, they’d oust resident … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … their RNA transcripts. All sequencing was done through the JGI Community Science Program . Using an ecology metric …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… becoming common images in many regions due to more extreme weather events such as heat waves, droughts and floods. The … and the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By …
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MGM Workshop at Fisabio Summer School 2025
Register here The workshop is addressed to students and professionals of … biomedical research, the health sciences and related fields who are interested in learning and sharing concepts, tools … the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia Ivanova and Rekha …
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Fishing for Novel Cellulose Degraders
… of equipment for fly fishing is a boxful of lures. Designed with feathers or wires to mimic an insect or a particular … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of potential applications to industrial processes. Summary JGI researchers developed a function-driven, single-cell …
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