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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational … tools to identify virus sequences, the design of new experimental approaches to link viruses to their …
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I-Min (Amy) Chen
Ph.D. in Computer Science. Her research has been focused on semantic and object-oriented data modeling, and biological data management. She was one of the co-authors and key developers of the … management and analysis system v.7.0: content updates and new features. Nucleic acids research Jan 2023 Camargo AP, …
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Busting the Unbreakable Lignin
New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to … cumulatively called lignocellulose, are the primary components of hardy cell walls. It’s the cellulose and …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, … of Science user facility located at Lawrence Berkeley National Laboratory, have collaborated with global researchers … their expertise in developing and managing public viral genomics resources such as analytical tools and data …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts … her team work with other JGI scientists in development of new, advanced mass spectrometry research products such as …
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The Power of One, Amplified
A preview of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell … another might exhibit few limitations to interactions and new connections, thus sharing more ideas, similar to the …
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Kanwar Singh
… using our high throughput pipeline. He also explores new methods for creating sequencing libraries and optimizing …
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A roadmap for research on crassulacean acid metabolism (CAM) to enhance sustainable food and bioenergy production in a hotter, drier world
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Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize
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Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science … up nearly 3 percent of the earth’s land surface. In the New Phytologist, researchers led by David Weston of Oak … model system for ecological and evolutionary genomics .” Understanding the nature and genetic basis of …
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Olpidium, The Key to the Origin of Terrestrial Fungi
Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … to the terrestrial ecosystems exposed fungi to numerous new ecological niches and triggered rapid diversification of … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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