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… be a specific host the virus has adapted to commandeer. For bacteriophage viruses, these hosts are microbes like … a new program called iPHoP (pronounced “eye-pop”,  freely available online ). It combines and evaluates multiple … different routes. To train the model, the team used 1,870 known virus-host pairs to generate a matrix of data points.  …

… The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the …

… Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published … lake, they found. Near the lower portion of the top layer, known as the interface, there is a strong chemical and … In December, January and February, the polar region’s summer months, this study found that the green sulfur …

… , Sebastien Duplessis of the French National Institute for Agricultural Research (INRA)  proposed sequencing a … to counter soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in 2010.       … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …

… Researchers at the JGI develop a tool to quickly and accurately identify mobile … and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in … by NERSC, another user facility at Berkeley Lab. geNomad is now accessible through the National Microbiome Data …

… reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes … make ethylene from certain organic sulfur compounds, and now we can see we can go beyond that into propanol, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … reports, and publish first-author papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt …

… technology from this biomanufacturing collaboration is available for licensing. The Science In  Nature Communications , … produced by living organisms. The collaboration between the JGI and the Foundry on this project highlights an  ongoing … Researchers create method for converting urine into high-value bio-implant material …

… productive food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree …