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2025 NeLLi Symposium
… Research Institute, the 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial … and the function of candidate lineages in biogeochemical cycles and beyond, as well as microbial symbioses. We aim to …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, … host microbes impact the regulation of global nutrient cycles. The JGI’s latest strategic plan (download a copy  … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Promoting the Power of Viral Metagenomics
… . The following guest piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by … early 2020, people all over the world have been forced to confront the awesome power that viruses have to affect … can exert great influence on earth’s carbon and nitrogen cycles. Currently one of the best ways to study such viruses …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of actinobacteria Streptomyces is more than just a funny word. The 500 species … particular interest due to their complex developmental life cycles and diverse specialized metabolism. ( Hear … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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JGI Early Career Researchers Featured in mSystems Special Issue
… head Emiley Eloe-Fadrosh outline more targeted approaches to reconstruct individual microbes in an environmental … approach uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools before sequencing to … While microbes regulate the planet’s biogeochemical cycles, viruses infecting microbes shape global ecological …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in … cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they must find a host, and not just any host … the roles viruses and their host microbes play in nutrient cycles. …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant … of the continental United States, occasionally pulling over to the side of the road to collect small weedy plants and … (Setaria viridis), a small model grass with a short lifecycle that uses a carbon fixation process known as the C4 …
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Fishing for Novel Cellulose Degraders
… A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces … is a boxful of lures. Designed with feathers or wires to mimic an insect or a particular movement, each of these … known to be key contributors to the planet’s biogeochemical cycles, but the vast majority remains uncultivated and …
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Three Join the JGI User Executive Committee
… month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of Oak Ridge National Laboratory and Elizabeth “Lizzy” Wilbanks of the University of … He’s interested in how microbes influence biogeochemical cycles in soils and sediments and plant-microbial …
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Defining a Pan-Genome for Antarctic Archaea
… are interested in learning how these microbes have learned to adapt from marine to hypersaline conditions by studying the microbial … microbial communities contribute to global biogeochemical cycles, and possibly cold-temperature enzymes for …
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How to Target a Microbial Needle within a Community Haystack
… Microbiology has developed, tested and deployed a pipeline to first target cells from communities of uncultivated … of microbes that play key roles in global biogeochemical cycles remains unexplored and uncultivated. Developing a more targeted genomic approach would allow researchers to focus on specific microbes within metagenome samples and …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … viruses impact many ecological processes, including carbon cycles. “Whether or not you planned it, viruses are most … Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the microbiome systems underpinning a broad …
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