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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI … of the Microscale Applications group at the JGI, whose team uses a semi-automated, standardized process to carry … last year, JGI’s user community has helped propel multiple efforts along these lines, all with the goals of better data …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … applications they may have in a wide range of research fields. A public repository of 52,515 microbial draft … about the biology and diversity of uncultured microbes.” Teams of researchers worked on multiple analyses harnessing …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The FICUS call allows researchers to combine the power of genomics and molecular characterization from the JGI and … researchers can also request access to the capabilities of the Biological Small-Angle Neutron Scattering (BioSANS) …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … microbiologist at the University of East Anglia, leads this effort to understand what makes polar photosynthesizers … such as photosynthesis and gene regulation.  Mock and his team then linked those species-level observations with data …
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Emiley Eloe-Fadrosh
… Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … Fellow at the Gordon and Betty Moore Foundation as part of the Marine Microbiology Initiative. She conducted her … at the Institute for Genome Sciences at the University of Maryland School of Medicine and her graduate work in …
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Soil virus offers insight into maintaining microorganisms
… to carbon cycling.  The Science Through a collaborative effort, researchers have identified a protein in soil … The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome … going on in soil, including  carbon cycling .  The team was led by researchers from the Pacific Northwest …
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JGI Announces 2023 Community Science Program Awardees
… Congratulations to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. Department of Energy (DOE) Joint Genome … Lab). “We’re very excited to start working with this years’ crop of CSP recipients, over half of which are first-time …
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Leveraging a Structural Blueprint to Rationally Engineer the Rieske Oxygenase TsaM
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Georg Rath
… Mr. Rath has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the boundary of life science and computational science with notable stops at NERSC, IMBA (Institute of Molecular Biotechnology, Vienna) and the High Field MRI …
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JGI Announces 2026 New Investigator Portfolio
… Kumar Gautam, Gareth Gillard, Audrey Goeckner, Jennifer Goff, Sarah Gonzalez Henao, Yang Hai, Julia G. Harenčár, … accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and … bioproducts, and plant–microbe interactions that enhance crop resilience and soil health. Proposals are accepted …
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Habitat-Lite: A GSC Case Study Based on Free Text Terms for Environmental Metadata
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. … field, and developing such tools has been a collaborative effort. For example, with support from the  Exascale … the combined resources of the JGI, NERSC and ExaBiome teams. Part 1: Many, Many Mers — While biologists were out …
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