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Thermus sediminis sp. nov., a thiosulfate-oxidizing and arsenate-reducing organism isolated from Little Hot Creek in the Long Valley Caldera, California
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of … JGI has previously sequenced , and provides a powerful snapshot of what soils across different burn severities look …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He … over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched scale-up of algal geomics and PhycoCosm … Igor Grigoriev is the Fungal & Algal Science Program Head at the JGI. Click to learn more about the program's areas of …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s vigilant stewardship as JGI’s … Ray oversaw the acquisition and renovation of Building 310, adding the crowning piece of the entire 80,000 square … Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and the Innovative Genomics Institute.  The Science Researchers report … in part by grants from the Paul Allen Frontiers Group, the National Science Foundation Graduate Research Fellowships and …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The … , information the Probst lab used to search for and find 13 additional predicted viral  genomes . The team dubbed … compared samples collected from an aquifer in 2012 and 2018 against a biofilm sample collected in 2018. They looked …
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JGI Hosts GPU Hackathon in May
… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical … high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility … sent out. The main benefit is professional growth and development for the developers, and the code owners will be able …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub for NIH program. While the microbes in, on and … potential ," is among the five focused on tool development. Specifically, the goal of this work is to develop … The work is supported by NIH Common Fund grant 1U01DE034196-01. The JGI team, including Kyrpides, Camargo, and …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… Tips for Successful Community Science Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  New Investigator call for proposals.  Tips: Contact us with your questions (jgi-jira+pm[email protected]) Carefully read our proposal call …
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Integrating Experimentation with Data
…   Registration for this meeting has closed           Registration fees:                   General attendees: $500     Students: $200      Postdocs: $250    … EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities dedicated to advancing …
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Progress Reports: 2002–2020
… FY18 Progress Report … FY13 Progress Report … FY10 Progress Report …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … assistant professor Suzanne Sindi from the School of Natural Sciences and started a program that offered a handful … summer research experience at the JGI. On July 26, 2018, the JGI celebrated the culmination of the fifth summer …
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