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How to Target a Microbial Needle within a Community Haystack
… microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Development of this protocol was enabled by the JGI’s  Emerging Technologies Opportunity Program . The ETOP …
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Tracing the Evolution of Shiitake Mushrooms
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … conducted by the US Department of Energy JGI (https://ror.org/04xm1d337), a DOE Office of Science …
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Building Sphagnum Genomic Resources
… carbon cycling impact.   The Science Enabled by the JGI’s Community Science Program (CSP), researchers are … model system for ecological and evolutionary genomics .” Understanding the nature and genetic basis of … draft genome for  S. fallax is already available on the  JGI plant portal Phytozome , and the S. magellanicum genome …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the way to seed but prevent the seeds from falling,” said JGI Plant Program head Jeremy Schmutz , who is also a … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on … students to participate in the DOE Joint Genome Institute (JGI)-UC Merced internship program, Lawrence is now a … that time, a collaborative internship program between the JGI and UC Merced faculty focused on bioinformatics was …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … ( The annotated algal genome is available on the JGI’s PhycoCosm data portal.) This research not only sheds …
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Fungus Fuels Tree Growth
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  … Ecosystems (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel Visel … the world. That said, we recognize that workforce in genomics, including JGI, is not representative of the diversity …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … in human and other vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research … transcriptome, epigenome and other functional genomics datasets generated by JGI user science projects. … BS …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership between JGI and the Molecular Foundry, a nanoscale research and … with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine … interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  Recently , … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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