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… platform for tracking JGI's sequencing projects and data warehousing. This platform streamlines project … Management Systems (LIMS), bioinformatics, and genomics data management. He has worked at several renowned … solutions for large-scale sequencing projects and data analysis pipelines.  …

… Community Science Program , allows us to work and share our tools with a widening circle of researchers whose work …

… such as individual genes, whole pathways, genome-editing tools, and reporters.” JGI-developed genetic engineering …

… with BER missions to provide the fundamental science to support innovations for bioproduction and advance their … a Laboratory-Directed Research and Development project supported by Berkeley Lab, JGI and Foundry researchers … This work was supported by laboratory-directed research and development …

… with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze these data with …

… too deep in the sea to get any sunlight, and yet they still support a unique array of microorganisms adapted to living … and metabolic potential of the communities studied. The datasets are available on the JGI’s  Integrated Microbial …

… samples in a single experiment — and integrated these data with single-cell gene expression maps. Together, the scale of data enabled by these approaches creates a vast resource … stricter filtering criteria provides a robust community dataset of improved quality; deep insights identify the most …

… used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new … reflecting factors such as the quality and number of datasets for human microbiome data. In other environments, …

… , Susannah Tringe , and Tanja Woyke  were part of a “big data” mining effort reported in  Nature Biotechnology that … from environmental samples around the world. Much of the data had been generated from samples provided by more than … National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy generation …

… effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …

… focus on Microbiome Research with an emphasis on Microbiome Data Science. His group is developing novel methods for … analysis, as well as mining and visualization of big data. …