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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … and whole chromosomes for bioenergy and bioproduct applications. The program has completed over 70 projects, … and facilitate whole genome gRNA design for CRISPR applications. … Synthesis Capabilities & Offerings … BOOST … …
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Partnerships: Myco-Ed
The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … the links below. Naturalist Myco Ed Fungal Genomics Education Project MycoCosm MycoEd group page Protocols, …
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Forming Scientific Connections and Building Community
The 11th cohort of JGI-UC Merced interns pick highlights from their summer … & Albert Wu Project: “ Pangenome de Bruijn Graph Simplification ” Peter Nguyen : “Being an JGI intern has been an … the forefront.” Mentors: Rex Malmstrom, Nandita Nath & W. Berkeley Kauffman Project: “ 16s Sequencing of Barcoded …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way are … repositories until the earliest of three points:  (1) publication of the data (including, but not limited to, …
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Chomping Toward Better Plastic Recycling
We know all kinds of things about plastic – except, how to break it down for …
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The JGI Data Portal: Improving User Experience
… from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a … Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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Expanding Virophage Diversity
… in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … unique MCP sequences.  Further analysis led to the identification of 328 “high quality” (based on completeness) diverse … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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A Step Toward Controlling Soybean Rust
… causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce … Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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Hiroshi Otani
… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo PhD, Biotechnology, University of Tokyo … Otani H, Mouncey NJ. RIViT-seq enables systematic identification of regulons of transcriptional machineries. Nat …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … You can learn more about how JGI data supports higher education in this JGIota , a Genome Insider podcast minisode.)  …
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Katherine Louie
… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … (Pactolus). … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. in Bioengineering, Arizona State … in situ kinetic histochemistry. Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread … in a pan-genomic context. … BS in Plant Science, Cornell University, NY; PhD in Biology, University of Illinois at … hybridum and its diploid progenitors. Nature Communications 11 (1), 1-16 …
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