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Genome sequence of Streptomyces sp. DSM 42143
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in … health and environmental processes. The Science In a recent Microbiome paper , scientists focused on the conifer needle microbiome. The phyllosphere, which is known as the aerial …
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2024 Progress Report
… the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab … 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed … culminated in a reference for the complex  sugarcane genome sequence. The JGI  partnered  with synchrotron user …
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Open Frameworks Training the Next Generation of Scientists
… biology analysis. KBase also supports  MICROnet (Microbiomes In Computational Research Opportunities … research and skill development while curating reusable microbiome data. Undergraduate educators are partnering with … around a community of instructors training students in microbiome research techniques, including bioinformatics …
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What Happens Underground Influences Global Nutrient Cycles
… on an aspect of the  Phenotypic Response of the Soil Microbiome to Environmental Perturbations   under PNNL’s Soil Microbiome SFA, which aims for a systems-level understanding of the soil microbiome and its phenotypic response to changing moisture. …
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Yasuo Yoshikuni
… interactions in various environments to improve crop yield, and developing a platform for building composite …
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Making a Lichen Together
… bioengineering symbiotic microbial consortia for bioenergy crops. And because lichens are dominant carbon and nitrogen … nitrocellulose filters in Petri dishes. The scientists also sequenced the fungus and photobiont’s genomes and compared … mere seconds or minutes — a trait that could help improve crop drought resilience. It’s a superpower even Marvel’s …
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Promoting the Power of Viral Metagenomics
… piece was written by Call, a postdoctoral fellow in the JGI Microbiome Data Science Group led by Kyrpides. Since early … hydrothermal vents – and computationally identifying which sequences represent viruses that were present in the sample. …
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Corals in Hot Water Get Help From Their Microbes
… a photosynthetic microalgae, and a little-characterized microbiome. When warm waters stress corals, it might be …
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JGI@25: Roots of a Mutualist Relationship
… and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published … a JGI Flagship Genome and the first tree to have its genome sequenced. Having this first genome sequence of a mycorrhizal fungus shifted the focus from …
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Draft Genome Sequence of the Ectomycorrhizal Ascomycete Sphaerosporella brunnea
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Genome Sequences of Actinobacteria from Extreme Environments in Colombia
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