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Evolution of a Fungal Gene Expression Regulator
… base is a methylation of the base cytosine at the 5th position on its carbon ring, or 5mC. In many organisms, 5mC is an … piece of how they regulate their genomes, but is not well understood in fungi. A team of researchers reported on the … conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of the terpene synthase gene family across … of eucalyptus to the flavor of wine, terpenes are ubiquitous. A diverse group of plant-produced organic compounds, … the portion of the work conducted by the Joint Genome Institute and the Joint BioEnergy Institute, support was …
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A Sorghum Pangenome Opens More Doors to Discovery
… a resource for breeders and researchers to harness the traits that let this biomass powerhouse thrive. Within its … in poor soils. In addition to bolstering sorghum fields, understanding this plant eventually offers avenues for … This gene controls whether a plant keeps its seeds attached when picked. Wild plants will ‘shatter’ their seeds off a …
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A Complex Confection Decoded: Sugarcane Reference Genome
… Sugarcane was the last major crop without a reference quality genome and now crop researchers can work toward … technologies for  biofuels and other bioproducts. Finally, understanding how brown rust disease resistance works in … by the USA Department of Energy (DOE) Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science …
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Tina Clarke
… Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in 2017 joined the Joint Genome Institute (JGI). Tina serves in an HR advisory role to … University. Early on, Ms. Clarke knew the importance of understanding human and group behaviors as her role in HR …
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Work With the JGI! Tips for a Winning CSP Proposal
… The JGI’s Community Science Program gives researchers access to all kinds of sequencing, ‘omics and bioinformatics capabilities — and it’s open to scientists at any career stage, anywhere in the …
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Mike Sneddon
… Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and … portals, tools, and the DOE’s emerging AI-enabled capabilities for science.  Dr. Sneddon is an accomplished leader in … Computational Biology and Bioinformatics from Yale University. …
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The Soil Blooms Green
… growth appears on top of farmers’ fields: a microbial community that might be quietly improving the soil. Penn State … researchers Mary Ann Bruns and Terry Bell are digging in to understand how. …
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SIPs with Standards
… (SIP) is a powerful technique for studying microbial communities. These experiments can show which microbes are handling specific nutrients, or what they're doing with those nutrients, and even how quickly. But there's a … Rex Malmstrom (JGI), and Roli Wilhelm (Purdue University), share a few different ways they're working to make …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… emphasize JGI interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  Community Science Program (CSP) call of the U.S. Department of … University aims to generate genome sequences from underrepresented green algae groups in a wide range of …
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Fungal Friends or Foes in Plant Roots
… genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their … fungi act as friends or foes. The Impact Microbial communities comprised of fungi and bacteria can thrive in plant … play key roles in maintaining the plant’s health and diversity, which can in turn boost yields for both food and for …
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How Microbes Can Protect Plants in Drier Straits
… proposal was recently approved through the JGI Community Science Program, to use microbiome science to help make …
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