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Dan Rokhsar
… Foskett Brown Chair, Computational Biology, UC Berkeley 2012 Cotton Biotechnology Award, National Cotton Council …
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JGI@25: Studying Sorghum’s Survival Skills
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
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2024 Progress Report
… Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, … in April 2024 — through serving an increased number of users with a record output of products, making data easier … A record number of primary users — 2,456 — had active proposals with us, along with …
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You Can Move, But You Can’t Hide
… of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory … Lab), with computing resources provided by NERSC, another user facility at Berkeley Lab. geNomad is now accessible … easy to use interface allows beginners and experienced users to import their data and access the geNomad tool to …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s Microbial Systems group. …
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Offerings & Capabilities
… of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help … DNA Sequencing , Biodesign and Metabolomics .  Many users rely on a multifaceted combination of genomic, …
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Katherine Louie
… the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … profiles from diverse biological and environmental samples in support of user science.  Capabilities offered by the platform are a …
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Ian Blaby
… Nature Communications 15(1) 3167. 2024 Simirenko et al ., gRNA-SeqRET: a universal tool for targeted and genome-scale gRNA design and sequence extraction for prokaryotes and … Applied and environmental microbiology . 78: 1, 144-155. 2012 …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine microbial … of multiple omics data from various environments — that JGI users can leverage to create a more complete picture of how … how salt triggers this metabolic shift, the team combined RNA sequencing across multiple time points with …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
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Expanding Virophage Diversity
… computational approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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