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… ActinoBase offers a public portal of insight into special groups of … Streptomyces and many other related organisms, requires using more specialized tools, skills and protocols,” … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …

… The JGI Engagement Webinar held November 5, 2020 (watch the  … from plants, microorganisms, and environmental samples using targeted and untargeted approaches. The webinar … JGI Metabolomics Program , along with Jenny Mortimer, Director of Plant Systems Biology at the Joint BioEnergy …

… Recent study shows eelgrass has been around about 2.5 million … when and how eelgrass adapted and evolved throughout its history. Their research, published in  August 2023 in  Nature Plants , was able to assess absolute time estimates for major colonization … by a PhD scholarship from the China Scholarship Council to L.Y. (number 201704910807), by a fellowship to M.K. in …

… Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the … Microbial Genomes and Metagenomes Program since 2011. Prior to joining the DOE Joint Genome Institute, Dr. Kyrpides led … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular …

…   To understand virus-host dynamics, computation helps fill in what … cultivation can’t. The Science At first, viruses are merely toolkits. To do anything, they must find a host, and not … of virus-host interactions opens the possibility of using phages to engineer microbial communities. One day, …

… Fine-tuning metabolic gene expression helps identify variants … Scientists have developed a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to … of essential genes in metabolic networks that were missed using traditional approaches. This novel form of …

… Antarctic algae need their vitamins; zinc fuels some of their most … chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play an outsize role in cycling carbon and … across different ocean latitudes from pole to pole, using metatranscriptome and metagenome data from the JGI. …

… Describing the largest analysis to date of the modified DNA … Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and functions, but the DNA … of specific 5mC methyltransferase (MTase) variants. Using new sequencing technologies for producing both …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … that showcase our collaborations and capabilities to enable great science that will help solve energy and … novel technique to access high-quality genomic information using minute quantities of DNA derived from individual …

… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and microfluidics at the … operationalizing new genomic technologies, integrating automated liquid handling and bioinformatics pipelines to … Biology, University of California, San Diego Postdoctoral training in bioinformatics, Lawrence Berkeley National …

… To provide broad plant genomic capabilities, the DOE Joint Genome … We did so by analyzing this huge sample set specifically using results from tissue and condition-specific expression … and KEGG pathway enrichments. Detailed documentation about using this resource is included under the “Help” tab on the …

… The 11th cohort of JGI-UC Merced interns pick highlights from … on their summer projects. Watch the short video here to see what they had to say about their experiences and what … Project: “ Investigating metabolic network of symbiosis using genome-scale metabolic models ” Pedro Antonio Perez …