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Chaparral wildfire shifts the functional potential for soil pyrogenic organic matter and nitrogen cycling
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Uncovering Sequence and Structural Characteristics of Fungal Expansin‐Related Proteins With Potential to Drive Substrate Targeting
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Floodplain nitrifiers harbor the genetic potential for utilizing a wide range of organic nitrogen compounds
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New Research Sheds Light on Diversity in the Deep Sea
… living near hydrothermal deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents … get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … plates pull apart. As those plates separate, seawater seeps through cracks in the Earth’s crust and reacts with very hot …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The FICUS call allows researchers to combine the power of genomics and molecular characterization from the JGI and … researchers can also request access to the capabilities of the Biological Small-Angle Neutron Scattering (BioSANS) …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … Massachusetts Institute of Technology he developed a high throughput approach for isolating individual bacterial cells … His group also handles the Stable Isotope Probing (SIP) Metagenomics pipeline  that reveals in situ functional …
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated … microbes help regulate the planet’s nutrient cycles and are potentially of use in fields ranging from agriculture to … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
…   The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise … to a mule, but that is still able to reproduce asexually through mitosis. The alga naturally produces high amounts of … which the alga can be genetically engineered, it has the potential to be imbued with effective capabilities needed …
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Streamlining Regulon Identification in Bacteria
… with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … protein. Researchers demonstrated the efficacy and potential of regulon identification by in vitro … are expressed when their functions are needed. Data yielded through RIViT-seq expand the known transcriptional …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More … Note that beyond quantity, input quality (i.e., presence of “intact” high-molecular weight DNA) is an important … currently sequenced without pooling, which yields ~ 180 Gb of data per library. Q: How much DNA/coverage is required …
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Team Science Reveals Important Protein in Poplar
… Knockout experiments showcase potential for engineering bioenergy crops The Science … Described as the “DOE Tree,” poplar is considered one of the  Flagship Plants for the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … This work was supported by the U.S. Department of Energy, Office of Science, Office of Biological and …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … economies. It also plays an important role in soil health through nitrogen-fixation and holds clues for maximizing … JGI, McClean and Schmutz have continued their work together unlocking the powers of the bean. Though the JGI no longer …
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