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Refining the Process of Identifying Algae Biotechnology Candidates
… multiple institutions have sequenced and analyzed the genome of an alga that thrives in saltwater (halotolerant) … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … involved in responding to various stresses, and its transcriptome to learn more about which genes expression …
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Transcriptomic Data Sets for Zymomonas mobilis 2032 during Fermentation of Ammonia Fiber Expansion (AFEX)-Pretreated Corn Stover and Switchgrass Hydrolysates
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Tanja Woyke
… Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research … is now her primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 … in the wild. Science 344, 909-913. Rinke et al. 2013. Insights into the phylogeny and coding potential of …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… On February 8, 2024, the DOE Joint Genome Institute and the Environmental Molecular Sciences … career level stages. We work with start-ups and mature companies, as long as the data are not proprietary.  Q3: What …
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Microbial community analysis of three hydrocarbon reservoir cores provides valuable insights for the assessment of reservoir souring potential
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Low Mutation Rate and Atypical Mutation Spectrum in Prasinoderma coloniale: Insights From an Early Diverging Green Lineage
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Ben Bowen
… 87(9), 4658–4666. Wang, Y., Kora, G., Bowen, B., & Pan, C. (2014). MIDAS: a database-searching algorithm for … Selected Publications …
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A User-Centered Approach to Accessing JGI Data
… requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. … metadata criteria. Wilson said that the Data Portal and  Genome Portal will continue to run in parallel for now. Eventually, he added, the Genome Portal will be retired once the same features are …
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Annotation survey and life-cycle transcriptomics of transcription factors in rust fungi (Pucciniales) identify a possible role for cold shock proteins in dormancy exit
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Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network
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Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18‐CBM5 chitinase to protect their hosts
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Jane Grimwood Named HudsonAlpha Genomics Chair
… City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … at three DOE Bioenergy Research Centers (BRCs) have expanded the network of common gardens and are exploring …
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