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Model Fern Reveals Insight into DNA Thievery in Ferns
… — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … Massive gene loss, rampant gene duplications, and even more ancient gene transfers from bacteria have all armed the … first published manuscript of a genome sequence generated through the OGG. For a long time, C-fern has served as a …
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Identifying the Microbial Cleanup Crew at a Superfund Site
PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … the microbes involved in successfully biodegrading PCE.  Through the JGI’s  Community Science Program , they were able to analyze the resulting metagenomic data. (Data from the project are available on the  …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the … when sunlight becomes scant, Ace Lake’s bacteria instead go through a boom and bust cycle aligned with light … collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  …
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Implications of the Plastid Genome Sequence of Typha (Typhaceae, Poales) for Understanding Genome Evolution in Poaceae
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The genome sequence of the psychrophilic archaeon, Methanococcoides burtonii: the role of genome evolution in cold adaptation
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights … in photosynthesis — in the cyanobacterium  Synechocystis . Through an array of experiments at universities and national … what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit … really fully exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard … back in 2016.” Alper’s first approved JGI proposal came through the Functional Genomics (formerly DNA Synthesis) …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … who led the research team and is the head of the Viral Genomics group at the JGI, thinks that if you’re a virus or … XSEDE computing resource (award DEB170007), and through a Challenge Grant from the California NanoSystems …
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Mindfully Moving JGI
JGI is in the process of shifting its operations from Walnut Creek to the heart of … 100 were silent. Twenty years after the JGI united the genomics expertise of three national labs in one long … JGI’s operations). At the JGI, that translated to sorting through the stuff accumulated in offices, labs, lockers, and …
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Cultivating Symbiotic Antarctic Microbes
The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in … biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … to carbon cycling, and is interested in understanding the genomic basis and ecological consequences of microbe-microbe …
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Genome Sequence of the Arctic Methanotroph Methylobacter tundripaludum SV96
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Complete Genome Sequence of the Haloalkaliphilic, Hydrogen-Producing Bacterium Halanaerobium hydrogeniformans
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