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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office …
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy … Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Gardeners and farmers around the country recognize that crop varieties … plant species have adapted to their local environments; for example, crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately identify mobile genetic elements like … and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in … even in massive datasets. geNomad employs two distinct approaches to identify both viruses and plasmids; one is …
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer experiences at the JGI … next generation of STEM professionals. Students can apply for internships and work onsite with an experienced … was always laid in sort of, in analysis. So sort of more computational generally. But yeah, no I love research, I've …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… biosensors shed light on how bacteria function and colonize diverse environments. The Science Cyclic di-GMP … in regulating microbial cellulose production and biofilm formation, which affects a number of environments, including … motility. By building on a previously developed combined approach, researchers at the University of California, …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … genomes, researchers were able to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently … Genome Institute, a DOE Office of Science User Facility, and supported by the Office of Science of the U.S. …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the development of numerous genomic resources that fostered the widespread …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 proposals have … 80 full proposals, resulting from 95 letters of intent. For the first time, 63 percent of the accepted proposals … several thousand Actinobacteria strains and then use computational tools to analyze biosynthetic gene clusters …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… Innovative technology from this biomanufacturing collaboration is available for licensing. The Science In  Nature Communications , … hydroxyapatite, a high-value biomaterial with a wide range of industrial applications. The team was led by researchers … This work was supported by laboratory-directed research and development (LDRD). The work conducted by the U.S. …
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