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… — a then-novel approach which allows scientists to study microorganisms that can’t be cultured by analyzing and then …

… optimized for high-performance computing environments. … KBase is a critical partner in enabling systems biology … go well beyond genome annotation and analysis. The JGI and KBase seek to enable users to seamlessly access and analyze … to systems-level modeling and understanding. JGI and KBase are designated DOE Office of Science Public Reusable …

… including the tropics, tend to be dominated by prokaryotes (microorganisms without a defined nucleus). Colder waters … nearer the poles, however, tend to favor eukaryotes ( microorganisms with a nucleus). These photosynthesizing …

… of making data more findable and easier to download is a complex one, so our joint team started small, in the … of data across organisms, enabling them to conduct more complex types of research without requiring them to build …

… transcriptomic atlas of acute stress response to low pH in multiple Issatchenkia orientalis strains., Microbial … Zhao and Yoshikuni, Discovering untapped biochemistry in microorganisms from hidden corners. Nature Review … … DNA Synthesis Science Program … Education … Selected Publications … Awards and Honors …

… of Española, the Santa Clara Pueblo and its nearby rural populations rely heavily on groundwater as their only source …

… consisting of fungal species from natural Arabidopsis populations around Europe. The JGI sequenced and annotated …

… in the ocean; this affects the growth and survival of the microorganisms that live there.  A  Communications Biology …

… tools for large-scale in situ gene expression analysis in multicellular organisms. During his postdoctoral training at … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, … F, Afzal V, Ren B, Rubin EM, Pennacchio LA (2009). ChIP-seq accurately predicts tissue-specific activity of enhancers . …

… “Many of these projects are large in scale and involve multiple collaborators, bringing together diverse expertise to address complex scientific questions.”  Of these 18 scientists, …

… the fruiting-related decomposition mechanisms of morel with multi-omic approaches, our results revealed a striking … Meanwhile, hints of potential assistance from co-habitant microorganisms were unmasked. Plant polysaccharides such as …