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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … As they infect microbes like bacteria, algae and protists, all kinds of viruses impact many ecological …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his … San Diego. As the Sequencing Technology Implementation Lead, he directs a multidisciplinary team responsible for piloting and operationalizing new genomic … training in bioinformatics, Lawrence Berkeley National Lab …
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. … to the real-time chat during Ray’s All-Hands tribute wrote, “Thanks for all you’ve done for users around the … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome … these teams provide analysis support and R&D for production and user science. He received his Ph.D. from the Wellcome … Blow carried out postdoctoral work at LBNL, where he worked on computational and experimental approaches to study genome …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited speakers shared how … work here . Edward Holmes, University of Sydney Using protein structures to assess scope of the virosphere Keynote …
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Graduate Students Get Thesis Research Opportunity at the JGI
… the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user facilities. As a result … Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab at … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… the sex chromosomes of mammals is, for the first time, seen in a plant. The Science Sex in plants can be befuddling. … hermaphrodites, expressing both male and female gametes in one individual. But some, including shrub willow  Salix purpurea , employ the evolutionary strategy we are far more familiar with: …
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Triggering Morel Fruiting
… Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the Institut National de la Recherche Agronomique (INRA) in France and Igor … and biochemical processes driving the fruiting of soil saprotrophic mushrooms. To date, how the nutritional …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 … (JGI), presented on generating vector representations of proteins in order to conduct more efficient protein sequence …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related to her thesis on cone …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the … Inspired by the Human Genome Project (HGP), and building upon the principles for open access in the field of genomics … necessary changes to JGI data policies. Since completion of the HGP, the JGI has sustained its commitment to …
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