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Igor Grigoriev
… of Plant and Microbial Biology at University of California, Berkeley. He contributed to the Human Genome Project … et al (2021) PhycoCosm, a comparative algal genomics resource.  Nucleic Acids Res. 49(D1):D1004-D1011 Swift et al … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …
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Computationally Classifying Fungal Lifestyles
… known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the … Genomes Project, which aims to provide a reference genome for each of the fungal families. Researchers had access to … genomes, they also built a high-quality phylogenetic tree for  Dothideomycetes . The data allowed the team to …
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Gene Expression: From On-Off Switch to Dial
… approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the … that were missed using traditional approaches. This novel form of intermediate expression, when used in addition to … Metabolic engineering could lead to sustainable pathways for making high-value bioproducts including biofuels. In …
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Axel Visel
… the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, … Deputy for Science Programs … Awards and Honors … Selected Publications …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… to human health. Three DOE national labs had people and resources focused on three human chromosomes: Lawrence … race was being waged. In this JGI@25 video, Susan Lucas, former JGI Production Department Head and current ESnet … with the HudsonAlpha Institute for Biotechnology. Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has … section as “those that rank in the top 1% by citations for papers published and cited between 2008-2018.” Less than … and Asaf Salamov were part of a team that presented the first large analysis of an Aspergillus fungal subgroup, …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent … called methanogenesis. Methanogenic microorganisms therefore play a critical role in the global carbon cycle, and … of methanogenesis, with metagenomic support from the JGI. First they were able to identify the potential for …
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Crysten Blaby-Haas
… joint user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … to co-functionality: Eukaryotic gene neighborhoods as a resource for function discovery. Mol Biol Evol  38(2): … Google Scholar … Education … Awards and Service … Selected Publications …
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What Happens Underground Influences Global Nutrient Cycles
… projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy … Research (BER) to harness the combined expertise and resources of two of the national user facilities stewarded … can combine EMSL’s unique imaging, omics and computational resources with JGI’s cutting-edge genomics, DNA synthesis …
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Effects of Polar Light Cycle on Microbial Food Web
… availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this polar … occupy more space on Earth than any other ecosystem. Therefore, understanding the microbial activity that dominates … years ago and has been well-studied by many researchers for nearly five decades. In these frigid systems, where …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Learning to Look
… answer the question, “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters … display. The search tool Roux and his colleagues developed first worked on a reference dataset that included genome … and also those associated with humans.” The work also used resources of the  National Energy Research Scientific …
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