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Computationally Classifying Fungal Lifestyles
… on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an … A team led by researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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River microbiomes from around the world: Kelly Wrighton
Kelly Wrighton and her group at Colorado State University in Fort Collins … the world’s river microbiomes. And they’re using team science to do it.   …
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Expanding Virophage Diversity
Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the number of known high …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … one of which is sweet sorghum Rio from a JGI Community Science Program project and another is Lupinus albus from a …
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Secondary Metabolites Advisory Committee
The SMAC is chartered by the Secondary Metabolites Program Head and report back to them. The … teams on how to operate and manage the particular Science Program. …
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Optimizing de novo genome assembly from PCR-amplified metagenomes
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How to Target a Microbial Needle within a Community Haystack
… microbes from complex environmental samples. The Science A team led by researchers at the Max Planck … worked with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head. In 2018, Dr. Fagnan … biology and bioinformatics approaches in support of meeting DOE mission critical programmatic goals. … Joubert et al., …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Ancient Algae Reveal Secrets of Plant Evolution
… helped plants conquer land over 600 million years ago. The Science By studying the genes of land plants’ closest algal … Community Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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From Textbook to Real World Applications
When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La Salle High School expressed an interest in learning more about the principles of synthetic biology, …
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