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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… This is the third and final episode of our series on a giant metagenome assembly … the specialized software and supercomputers behind this project. But every part of this project depends on lakewater samples — so this episode is a …
Learn more
Exploring Possibilities: 2022 JGI-UC Merced Interns
… In this short video, UC Merced undergraduate and graduate … internship experiences have influenced their careers in science. Hear more about what they learned from working with … enough experience to make really good contributions to the project. Also my area of expertise over the past couple …
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user facility … topics that the JGI supports that advance DOE Office of Science Biological and Environmental Research (BER) … Program over the past decade in gene regulatory network projects supported by the CSP, and as part of microbiome …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of … — A Vision for Integrative and Collaborative Genome Science , the culmination of an eight-month intensive … ‘vision’ is truly a tour de force,” said Mary Maxon, Biosciences Associate Laboratory Director, of the 100-page …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have … our collaborations and capabilities to enable great science that will help solve energy and environmental … many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the main impact of …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as DNA viruses, RNA viruses …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, … research was conducted at the JGI through the DOE Office of Science Graduate Student Research (SCGSR) program , which … wetlands in south Texas,” he explained. “In terms of my project, I wanted to incorporate that CSP, but also look at …
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JGI announces 2024 Functional Genomics awardees
… genomics research from reseachers who translate genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and … in support of advancing the bioeconomy.  This year’s project goals range from improving crop productivity for …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth … DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on … University in Fort Collins. He’s part of a JGI-supported project studying the world’s rivers and their microbial …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who … management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and impactful … as part of the Early Career Research Program (ECRP). His project, “Characterizing Virus-Driven Alterations of …
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JGI announces 2025 Functional Genomics awardees
… Kathleen Scott, Tiffany Taylor, Setsuko Wakao and Benjamin Woolston. ] Each year, the JGI accepts proposals for … Through our  CSP Functional Genomics call , we look for projects that will leverage the JGI's DNA synthesis and … in support of advancing the bioeconomy. This year's project goals range from engineering drought-tolerant woody …
Learn more
Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome … of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions …
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