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Ancient Algae Reveal Secrets of Plant Evolution
Research uncovers the genetic foundations that helped plants conquer land over 600 million years … tolerance and multicellularity enabled plants to develop complex structures and adapt to changing environments — …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the norm when it comes to …
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Cultivating Symbiotic Antarctic Microbes
Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The Science Researchers … organisms as had been originally thought. The Impact The Antarctic lakes are a “treasure trove” of unknown microbes … JGI is sequencing large numbers of microbes and microbial communities that contribute to carbon cycling, and is …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the … researcher Joseph Napier from the Juenger lab and computational biologist Paul Grabowski of HudsonAlpha … an unremarkable, homogenous group and raised several important questions. Where did the 8X variant come from? Did they …
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Jeremy Schmutz
… working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed … the DOE human chromosomes 5, 16, and 19. Following the completion of the human genome project in 2003, he developed … For the past 13 years, Mr. Schmutz has directed the JGI Plant Program, focusing on the organization of community …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… is a group of tiny hitchhikers. These organisms are abundant and yet exceptionally small, with mini genomes to match. As a result, they … acquire carbon efficiently and convert it to usable organic compounds. However, no microbe works alone. Archaea, …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify … from uncultivated microbes and viruses. We develop computational approaches to sift through thousands of … Nov 9. Vyshenska, Dariia et al. (2023)  A standardized quantitative analysis strategy for stable isotope probing …
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Extracting the Secrets of Secondary Metabolites
CRAGE-CRISPR combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth … edits affect functionality.  CRAGE allows for the transplanting of these BGCs from one organism into an alternate …
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Matt Blow
Support Analysis group. He received his Ph.D. from the Wellcome Trust Sanger Institute and Cambridge University … Blow carried out postdoctoral work at LBNL, where he worked on computational and experimental approaches to study genome … Shulse et al. 2019. Engineered Root Bacteria Release Plant-Available Phosphate from Phytate. Appl Environ Microbiol …
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Tina Clarke
… joined the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in … (JGI). Tina serves in an HR advisory role to Division/Area management and supervisors to recommend solutions and appropriate actions on diverse HR …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
Edward Lu and mentor Miguel Romero Sean Saki and mentors  Zhong Wang and Bryce Foster Sivagunalan Thamilarasan and … me to the future.  Shari Larsen : I didn’t grow up with computers, and it seems like my younger counterparts are a … Saki : Yeah, I think the, the main thing for me is since I want to go to industry a lot sooner, is having the experience …
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Supercharging SIP in the Fungal Hyphosphere
… stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, … most widespread type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial …
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