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Virus-Microbe Interactions of Mud Island Mangroves
… his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student Research (SCGSR) program , which awards graduate students the opportunity to … at one of the DOE national laboratories or national user facilities. Baker had worked with the JGI through a …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research Molecular … et. al. 2017 Sequencing and functional validation of the JGI Brachypodium distachyon T-DNA collection. Plant Journal …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … biodegrading PCE.  Through the JGI’s  Community Science Program , they were able to analyze the resulting …
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Gotta Catch 'Em Gall
… ways to engineer plants. So they’ve looked into wasps that program oak trees to raise their young in structures called … how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these weird little pods. …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… ecosystems across various biological contexts. The program fosters intimate, dynamic interactions, offering an …
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Doubling Down on Known Protein Families
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … genes were typically discarded from any analysis as useless information. These represent the ‘unknown unknowns’ because …
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Computationally Classifying Fungal Lifestyles
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … work was enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have … 25  Dothideomycetes species, and also provides more information about speciation events. … The work conducted by …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials … Molecular Foundry, a nanoscale research and knowledge-based user facility at Berkeley lab. She earned her PhD in … she joined LBNL to spearhead the development of a joint user capability between the JGI and Molecular Foundry for …
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NeLLi — Symposium on New Lineages of Life
New Lineages of Life Lead Emiley Eloe-Fadrosh, Metagenome Program Tanja Woyke, Microbial Program Robert Bowers,  User Project Coordination Rekha Seshadri,  Functional …
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The Expanding Universe of Methane Metabolisms in Archaea
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome data … related to known methanogens. With the help of this information, the researchers found evolutionary … found on early Earth.”  Through the JGI Community Science Program, Inskeep and McKay recovered metagenome-assembled …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and … lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and the data has been …
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FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus
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