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JGI Launches Latest Strategic Plan
… — A Vision for Integrative and Collaborative Genome Science , the culmination of an eight-month intensive … milestones. JGI Director Nigel Mouncey credits JGI Science Program Deputy Axel Visel for driving the monumental effort, … our Berkeley Lab colleagues, particularly with the other user facilities including the Advanced Light Source, the …
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Extracting the Secrets of Secondary Metabolites
… helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not … of interest. Using CRAGE to domesticate target microbes, users of the U.S. Department of Energy (DOE) Joint Genome … into other bacteria, thereby enhancing the scientific community’s understanding of how secondary metabolites are …
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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High-resolution phylogenetic microbial community profiling
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The epsomitic phototrophic microbial mat of Hot Lake, Washington: community structural responses to seasonal cycling
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Subsurface hydrocarbon degradation strategies in low- and high-sulfate coal seam communities identified with activity-based metagenomics
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JGI Welcomes New UEC Members
The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice … policies and practices that affect users and their access to technical capabilities JGI offers, as well as proposal …
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JGI@25: The Little Alga That Could
… our collaborations and capabilities to enable great science that will help solve energy and environmental … by Daniel Rokhsar, head of the JGI’s Computational Biology Program, along with JGI Computational Scientist Simon … launched over a dozen of new Chlamydomonas genome-related Community Science Program projects of all kinds,” noted Igor …
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Simon Roux
… to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of … to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of … Life Sciences, Université Blaise Pascal, France Ph.D. in Bioinformatics, Ecology and Evolutionary Biology, Université …
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Streamlining Regulon Identification in Bacteria
… coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions is part of the … any particular factor. Predicting those relationships bioinformatically is almost impossible, and the experimental … Both are members of the JGI’s Secondary Metabolite Science Program, which Mouncey leads. RIViT-seq is a three-step …
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JGI-UC Merced Interns Share Their 2021 Experiences
UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in professional … for their PhD research. And for the first time in this program’s history, two interns returned to re-engage with …
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Root-associated bacterial communities and root metabolite composition are linked to nitrogen use efficiency in sorghum
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