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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science … and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled … clinical cancer diagnostics company, where he led the Production Informatics team in delivering validated …
Learn more
Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… recognize that crop varieties grow best in certain regions. Most plant species have adapted to their local environments; for example, crop and ornamental … Identifying and breeding varieties that have high productivity across a range of environments is becoming …
Learn more
Informatics Advisory Committee
… The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI … IAC is chartered to render advice, guidance, and counsel on the effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) activities and strategic plan. The IAC …
Learn more
Game On: High School Students Drive Everglades Metagenomics Study
… a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project … second year A-Level Advanced International Certificate of Education (AICE) Biology class at Florida’s Boca Raton … between the class and the JGI, the students found out that their project was approved and was being funded under the …
Learn more
Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: … and development and its applications. “I moved to UC Davis in 2014,” recalled Philipp Zerbe of the University … looked at how different bioenergy relevant plants can produce species-specific blends of terpenoids, naturally …
Learn more
JGIota: The Algae Nicknamed ‘Chlamy’
… episode is about a tiny, single-celled alga – Chlamydomonas reinhardtii – that’s managed to have a big impact. UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its …
Learn more
Trent Northen
… programs using mass spectrometry for energy and environmental research, including through the Joint BioEnergy … the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic … available to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to …
Learn more
Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm microbial diversity is … families known up until now, and identified many novel structure predictions,” said lead author on the paper Georgios … the mysteries concealed within the “dark” functional realm. Their focus sharpened on deciphering the intricate world of …
Learn more
GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately … of discovering and modelling complex biological sequences such as biosynthetic gene cluster structures. Zhong Wang, a … to explore whether we can leverage this model to help their research projects.”  There is still trouble-shooting …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… JGI researchers nearly tripled the available fungal mitochondrial genome data, unlocking new potential for AI-driven … studies of energy metabolism. The Science Researchers produced nearly 10,000 new annotations of fungal mitochondrial … the kingdom, confirming that mitochondrial genes reliably reflect the broader evolutionary relationships among fungal …
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Steven Wilson
… Since 2018, Mr. Wilson has served as the Systems Engineering Group lead.   The … applications that span the lifecycle of activities at JGI - proposal submission and review, project and work order … the JGI as an Instrumentation Engineer where he added structure and process to the group by developing SOPs for …
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Waiting to Respire
… to ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to produce their own food and generate oxygen as a byproduct. The … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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