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The JGI Data Portal: Improving User Experience
The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI … complete this task. Improving the download process for this group of users offered the promise of an immediate benefit. …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in … EA, et al. 2016. Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs. Nature … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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JGI@25: The Little Alga That Could
JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 the full genome was sequenced and … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … on green algae. “The Chlamy genome launched over a dozen of new Chlamydomonas genome-related Community Science Program …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
Gardeners and farmers around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their … breeders aren’t interested in waiting decades to develop new crops. One example is an ongoing collaborative effort to …
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Jeremy Schmutz
Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back … responses to natural drought stress in Panicum hallii . Nature Communications 9: 5213. Huang, P et al. 2017. … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …
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Intrinsic and Extrinsic Programming of Product Chain Length and Release Mode in Fungal Collaborating Iterative Polyketide Synthases
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to bioprospecting. The Science … can uncover more about cellulose-degrading microbes. The new technique is another tool for microbial ecologists to … caught several microbes from known cellulose-degrading groups, the researchers also hooked and were able to …
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Axel Visel
Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the … Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, …
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Nandita Nath
Nandita is involved in developing new methods to improve genome recovery from single cells and to build sequencing …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific … and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating … multiple techniques and was demonstrated using a specific group of marine bacteria called “Vis6” that are found in …
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research … management and analysis system v.7.0: content updates and new features. Nucleic acids research Jan 2023 Camargo AP, … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …
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Cultivating Symbiotic Antarctic Microbes
… cultures reveal they are symbionts and not free-living organisms. The Science Researchers employed multiple … , a team led by Rick Cavicchioli at the University of New South Wales along with researchers at the U.S. … membrane lipids, suggesting they rely on  Hrr. lacusprofundii for them. One of the most distinctive features of the …
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