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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements metagenomics … the value of conducting large-scale single cell genomics by collecting nearly 500 single cells from a single low … mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role he supervises the Genome … genomic technologies and to understand genome function in bacteria. … BS in Biochemistry and Biological Chemistry, Nottingham University, UK PhD in …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a … enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … than historically presumed — widening the avenues for exploring methane as a source of bioenergy, better …
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Building Wet and Dry Lab Skills
… Summer 2025 marked the second year of Alabama A&M University students coming to the DOE Joint Genome Institute for research and training experience funded … analyses.  When they weren’t in the lab, they were either exploring Berkeley and acclimating to the weather or …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Congratulations to the 2023 Highly Cited Researchers from the JGI … influence in their chosen field or fields through the publication of multiple highly cited papers during the last … were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the …
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Genome analysis of ‘Candidatus Ancillula trichonymphae’, first representative of a deep‐branching clade of Bifidobacteriales, strengthens evidence for convergent evolution in flagellate endosymbionts
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… that crop varieties grow best in certain regions. Most plant species have adapted to their local environments; for … and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … —have expanded the network of common gardens and are exploring improvements to switchgrass through more targeted …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science … perennial grasses using Panicum hallii (Hall’s panicgrass), by generating two complete genomes from varieties that … team conducted several large-scale field experiments and analysis to find relationships between sequence variation …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology and … to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His team is also developing … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in …
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Lipid analysis of CO2-rich subsurface aquifers suggests an autotrophy-based deep biosphere with lysolipids enriched in CPR bacteria
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