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SoyCSN: Soybean context‐specific network analysis and prediction based on tissue‐specific transcriptome data
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Genome Data Provides High Support for Generic Boundaries in Burkholderia Sensu Lato
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data
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The IMG/M data management and analysis system v.7: content updates and new features.
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can … recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed significant … increased nutrient uptake and decreased cell death.  Scientists then extracted RNA to analyze gene expression, to …
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Accelerating Metagenomics Discoveries with Deep Learning
On July 6, scientists from Lawrence Berkeley National Laboratory … recognition: for example, a camera’s ability to recognize your face and distinguish it from your friend’s. Biologists … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Computationally Classifying Fungal Lifestyles
… on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an … of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel Visel teamed with University of … staff, Mouncey explained: “One of the hallmarks of JGI is our diverse workforce and our diverse collaborators around …
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Alabama A&M Interns Access An Abundance of Knowledge
… enriching workshops and networked with fellow interns and scientists alike. Want to learn more about their experience? … A&M University this fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna … a JGI intern means not only just watching and observing your mentor, but also being a support for them and …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers … about their ability to adapt to changing environments, scientists have turned their attention to the pangenomes of … of the  Marchantia pangenome, scientists developed a resource that associates plant’s genetic variants with specific …
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