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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields …
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Genome sequence of the palaeopolyploid soybean
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Kanwar Singh
JGI users by processing their single cell samples using our high throughput pipeline. He also explores new methods for creating sequencing libraries and optimizing various processes. …
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Triggering Morel Fruiting
… is triggered when nutrients are acquired from an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following guest … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Four amino acids define the CO2 binding pocket of enoyl-CoA carboxylases/reductases
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Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi
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Learning to Look
… answer the question, “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters … result of this hidden diversity of inoviruses now overhauls our perception of this virus group – from minor curiosities … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… manage the growth, yield and climate resilience of algae — for potential use as biomass or in biomass conversion to … recorded. Samples were taken again at two, six, 12 and 24 hours. By the 24-hour mark, these algae showed significant … This was facilitated in part by RNA library preparation and sequencing from the U.S. Department of Energy (DOE) Joint …
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JGI Workshop at SIMB NP Meeting
… untapped metabolic capabilities is often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters … needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE Office of Science …
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Boosting Small Molecule Production in Super “Soup”
… to make products such as proteins, and the mechanisms for maintenance to keep processes running smoothly. As … able to make the same amount of a product in just eight hours that growing cells take three days to make, which is a … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified other … populations rely heavily on groundwater as their only source of clean drinking water. Over 90% of the PCE in the …
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