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Identifying the Microbial Cleanup Crew at a Superfund Site
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … involved in successfully biodegrading PCE.  Through the JGI’s  Community Science Program , they were able to analyze the resulting …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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A Natural Mechanism Can Turbocharge Viral Evolution
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … (MCB-1553721), the Camille Dreyfus Teacher-Scholar Awards Program, and the California NanoSystems Institute (CNSI) … acknowledge support from the EMERGE Institute (NSF #2022070). Sequencing of the Stordalen Mire samples used …
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Accelerating Metagenomics Discoveries with Deep Learning
… the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … such as  Mash and  BBsketch , whose lead developer is JGI software developer Brian Bushnell, no alignment-free … order to vectorize protein sequences. Sevim is part of the JGI Genome R&D Group and is one of more than 100 scientists …
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Genome sequence of Phaeobacter daeponensis type strain (DSM 23529T), a facultatively anaerobic bacterium isolated from marine sediment, and emendation of Phaeobacter daeponensis
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based …
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Construction of high resolution genetic linkage maps to improve the soybean genome sequence assembly Glyma1.01
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Genome Sequence of the Verrucomicrobium Opitutus terrae PB90-1, an Abundant Inhabitant of Rice Paddy Soil Ecosystems
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Comparative proteomic profiles of the marine cyanobacterium Trichodesmium erythraeum IMS101 under different nitrogen regimes
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Complete genome sequence and the expression pattern of plasmids of the model ethanologen Zymomonas mobilis ZM4 and its xylose-utilizing derivatives 8b and 2032
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Genome sequence of Ensifer meliloti strain WSM1022; a highly effective microsymbiont of the model legume Medicago truncatula A17
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Transcriptomic Data Sets for Zymomonas mobilis 2032 during Fermentation of Ammonia Fiber Expansion (AFEX)-Pretreated Corn Stover and Switchgrass Hydrolysates
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