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Nikos Kyrpides
IL. He did his postdoctoral studies with Carl Woese at the University of Illinois at Urbana-Champaign and at Argonne … and visualization of big data. … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and Biotechnology, University of Crete, Greece … Pavlopoulos GA et al. (2023) …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… yeast’s native chromosomes with synthetic versions. This project has turned out to be an international collaboration, …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory, to create the database. JGI provided metagenome and metatranscriptome sequences, as … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team …
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
… of 2016,  DOE CGSF recipient Adam Riesselman of Harvard University worked with DOE JGI's Sam Deutsch. Learn more about the DOE Computational …
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JGIota: Sequencing Shiitakes with David Hibbett
David Hibbett of Clark University fills us in on the kind of decay that makes …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile … approach. The tool was employed to build version 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 … used computational resources from the Exascale Computing Project (17-SC-20-SC), a collaborative effort of the U.S. …
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Modulation of sensory perception by hydrogen peroxide enables Caenorhabditis elegans to find a niche that provides both food and protection from hydrogen peroxide
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Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18‐CBM5 chitinase to protect their hosts
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River microbiomes from around the world: Kelly Wrighton
Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with … own perspectives. The interns from this cohort and their JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Roland Hatzenpichler is an associate professor at Montana University and associate director of its Thermal Biology … of methanogenesis, with metagenomic support from the JGI. First they were able to identify the potential for …
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