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The Expanding Universe of Methane Metabolisms in Archaea
… a key role in determining the composition of the Earth’s atmosphere and regulating the global climate for life to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly … that methanogenesis is one of the oldest metabolisms, with the first traces possibly at ~3.5 Gy (billion years),” …
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Computationally Classifying Fungal Lifestyles
As a proof of concept, researchers developed an algorithm that “taught” a computer how to classify 101 representative … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Dothideomycetes . The data allowed the team to reclassify 25  Dothideomycetes species, and also provides more …
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Picking Up Threads of Cotton Genomics
… and importance in the fabric of our lives. In the United States, cotton production centers around two varieties: 95 … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … genomes identified unique genes related to fiber and seed traits in the domesticated  G. barbadense and  G. hirsutum …
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Tour the IGB
… of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, click and drag to look … zoom in and out. 1st floor 2nd floor 3rd and 4th Floors The JGI mural on the 3rd floor whimsically references dozens of iconic JGI contributions to advancing the frontiers of …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … kingdoms, with archaea having around 15, eubacteria around 25, and eukaryotes having slightly larger numbers due to …
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University of California, Merced Internship Program
Originally conceived as a UC Merced graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to … work and coding. Receive mentorship, network and connect with Lab staff. Increase their technical skills and …
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Natural Prodcast
Natural Prodcast is a “fireside chat”-style podcast about … to medicine, the environment, and human health. As the JGI acts on its goals in — and builds out its capabilities … field about current and future developments, and how the JGI can be part of that space.   …
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Additional Outreach Efforts
Interested in reading more JGI intern and mentor success stories? Read more below. …
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A Collaboration to Improve Plant Genome Annotations Across Species
… specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … data from two ecotypes of  Panicum hallii and multiple switchgrass ( Panicum virgatum ) experimental data. Sarah:  …
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management … The course had a defined set of objectives, and started with an image of a spoonful of dirt with the question: Do …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … and cancer genetics. Dr. Blow carried out postdoctoral work at LBNL, where he worked on computational and experimental … Free-Living Growth and during Nitrogen-Fixing Symbiosis with  Medicago spp. Msystems 7 (1), e01092-21 3. Baumgart et …
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Giant viruses with an expanded complement of translation system components
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