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Olpidium, The Key to the Origin of Terrestrial Fungi
… many obscure fungi of Chytridiomycota (the “chytrids”).  A collaborative team led by Joey Spatafora at Oregon State … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is … has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology … for building composite materials. Before joining the JGI, Dr. Yoshikuni was co-founder and chief science officer …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… and other traits when migrating back to the ocean. The Science Scientists have discovered flagella in an unexpected … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National … Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of the Earth’s … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National … Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported under contract no. …
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Leadership
… the direction of programs and initiatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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Protocols
… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … to culture these microbes in the lab. After joining the JGI, he formed the Microscale Applications group to operate … a similar single-cell genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His …
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Partnerships: Adopt-A-Genome
… a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation … of microbial genomes that have been sequenced by the JGI though not formally analyzed or published.  The purpose … of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions …
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Uncovering Novel Genomes from Earth’s Microbiomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Building upon these resources, KBase, a multi-institutional collaborative knowledge creation and discovery environment …
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Eelgrass Proves to Be Much Younger Than We Thought
… about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National … fellowship to M.K. in the Helmholtz School for Marine Data Science (grant number HIDSS-0005) and by a grant to J. …
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Tanja Woyke
… of User Program position in 2021. In addition to her JGI appointment, she also holds an Adjunct Scientist appointment at the Bigelow Laboratory for Ocean Sciences since 2012 and an Adjunct Professor at the University of California, Merced's School of Natural Sciences since 2015. Prospective users with specific …
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Len Pennacchio
… Len Pennacchio is the JGI's Deputy of Genomic Technologies. oClick to learn more about the offerings and capabilities we offer JGI users to help advance their science. … The Deputy of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data …
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