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Biotech Partners
Learn more
Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… Functional Genomics proposal calls, projects can request up to 50 polar and 150 nonpolar metabolomics analyses. For … themselves for example using GNPS. Q:  Since the enzymes are doing the heavy lifting to make the metabolites, … plants? If yes, we are based in South Africa, How can this team be of help to us in research design and execution? A:  …
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Leo Baumgart
… Implementation Lead, he directs a multidisciplinary team responsible for piloting and operationalizing new … science projects spanning bacteria, fungi, and plants. His team is also developing single-nuclei sequencing methods to … L. Flockhart, Greg A. Gregory, Edward Z. Li et al. "Shoring up the base: the development and regulation of cortical …
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Alabama Agricultural & Mechanical University Internship Program
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… “Natural language has grammar and structure, and words set up in a certain way. Genomes work in a similar manner. From … data. Trained on numerous versions of genes and enzymes, GenomeOcean can generate diverse types of enzyme … structures and functions. Wang worked with the MetaHipMer team with Berkeley Lab’s Computing Sciences Area to develop …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… in 2018. She selected one of the projects posted by JGI fungal researchers, Igor Grigoriev and Asaf Salamov, and … over a billion years old. It’s an insanely diverse group of organisms that include some delicious additions to a … about what it means to be a scientist. “To see how team science is done at an advanced and large research …
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CalTeach
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A One-Stop Shop for Analyzing Algal Genomes
… more than 100 algal genomes, compare them, and visualize supporting experimental data. The Impact Algae are important … complex and difficult to sequence and understand. A team of researchers led by Algal Genomics Program lead Igor … metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing plant genomes. …
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10 From JGI on the 2019 Highly Cited Researchers List
… to: Project Manager Kerrie Barry, Cross-Field Category Fungal and Algal Program head Igor Grigoriev , Plant & … Science category Plant Program Library Construction Group Lead Jane Grimwood (at HudsonAlpha), Cross-Field category … in the Proceedings of the National Academy of Sciences, the team established community gardens of switchgrass plants in …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… abundant representatives of deep subsurface ecosystems. A team of researchers described how the viruses repeatedly … The army of the dark wizard Saruman repeatedly tried to break through, finally resorting to explosives to succeed. … in the samples that corresponded to eight separate groups of viruses. To visualize one particular viral genome in …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… tools has been a collaborative effort. For example, with support from the  Exascale Computing Project , the JGI — … like — let’s write a proposal to sequence samples that will break JGI’s computers,” McMahon said, laughing, when we … the combined resources of the JGI, NERSC and ExaBiome teams. Part 1: Many, Many Mers — While biologists were out …
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Boosting Small Molecule Production in Super “Soup”
… and biofuels . This first report of their work, supported through the Emerging Technologies Opportunity … to accelerate bio-design and identifying the best sets of enzymes that enable synthesis of sustainable chemical … The work started with yeast strains engineered by Alper’s team to convert the sugar glucose to the products including …
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