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Prokaryote Program User Advisory Committee
The Prokaryote Advisory Committee is chartered to offer advice, guidance and counsel on the effective management and strategic objectives of the microbial and metagenome programs and report back to … functions nor does it direct the Programs’ management teams on how to operate and manage the Programs. …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that there is a striking division …
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NeLLi — Symposium on New Lineages of Life
… 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis. Further, the …
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Ancient Algae Reveal Secrets of Plant Evolution
… 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , scientists have enhanced our understanding of how early plants transitioned from water to land. Key … conditions could inform the development of resilient crop varieties able to grow in marginal lands and with …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental … you will do with the data! Ideally, you or someone on your team will have expertise in this area, or can demonstrate … the 500-gigabase cap and that you don’t request outside of the sample range that’s listed. Q: What are the pros and …
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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have revisited a … below, but no oil in between.” To find an explanation, his team tracked the thousands of bacterial and archaeal species … different fractions of the oil. Hazen described the early efforts in his keynote talk at JGI’s 2011 Annual Genomics of …
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JGI Hosts GPU Hackathon in May
Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore … is a five-day coding event that offers participating teams the opportunity to either jumpstart acceleration or …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – … It takes a really special person to be able to lead such an effort and Ray is that person.” For nearly all of his 15 … He did this with aplomb, managing his dedicated “Ops Team” who dealt with leaky roofs, backed-up toilets, and …
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Gut Fungi: Unexpected Source of Novel Chemicals
The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest … meal. In their evolutionary history, these fungi branched off early from aerobic fungi, which can breathe oxygen — … novel compounds to help bolster the bioeconomy. Summary A team led by Michelle O’Malley, a chemical engineer at the …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  Nature Microbiology an important … ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the genome. “CRAGE is central to our ability to offer host-engineering for our users,” says JGI Director …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley … supported by NIH Common Fund grant 1U01DE034196-01. The JGI team, including Kyrpides, Camargo, and Roux, has an …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the … are a little bit stronger in computing, so I was kind of worried coming into the, the internship that maybe I … me, previously I had I don’t know how to communicate with team members previously. I think I may keep doing research, …
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