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Learning to Look
… a unique chronic infection cycle. “We’re not sure why we systematically manage to miss them; maybe it’s due to the … small genomes can be easily manipulated through genetic engineering, inoviruses are used for several … student in bacterial immunologist Joe Bondy-Denomy’s lab at the University of California, San Francisco. Both are …
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Who We Are
… user facility located at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and … Our location at the IGB fosters team science and collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome …
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2024 Progress Report
DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are … in studies of complex biological and environmental systems. We optimize our service to the community through …
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Effects of Polar Light Cycle on Microbial Food Web
… go through a boom and bust cycle aligned with light availability. A long-running time-series study offers a first … nutrient cycling that evolved separately from other similar systems, and offers new clues into a unique environment in … environments occupy more space on Earth than any other ecosystem. Therefore, understanding the microbial activity that …
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Uncovering Novel Genomes from Earth’s Microbiomes
… diversity. Because most microbes cannot be cultivated under laboratory conditions, their genomes can’t be sequenced … Berkeley National Laboratory (Berkeley Lab), and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the … microbes.” Teams of researchers worked on multiple analyses harnessing the genome repository, and the IMG/M team …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
User Executive Committee, on how that study went from the lab to the classroom. …
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Ancient Algae Reveal Secrets of Plant Evolution
… how early plants transitioned from water to land. Key gene groups involved in stress tolerance and multicellularity … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), scientists sequenced the genomes … no. DE-AC02-05CH11231. P.-M.D is supported by the project Engineering Nitrogen Symbiosis for Africa (ENSA) currently …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), comes in. The JGI is uniquely … to foster interdisciplinary collaborations,” says Philipp Zerbe, the lead PI on this project. “I view the program as … company LanzaTech to develop a “cell-free” gene expression system. Developed through the JGI DNA synthesis Community …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… as well as contributing to nutrient cycling in these ecosystems. Researchers studied P. psychrophila’ s stress … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). In their analysis, they found the … . … The study was funded by Natural Sciences and Engineering Research Council of Canada (NSERC) Discovery …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… of how these bacteria evolved could help inform engineering microorganisms for biofuel production and other … of Science User Facility at Lawrence Berkeley National Laboratory, has unveiled these motility tools in hot spring  … of this project was supported by a Natural Sciences and Engineering Research Council of Canada Discovery Grant to …
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JGI announces 2024 New Investigator portfolio
… list of researchers whose proposals were accepted for 2024. Harnessing the JGI’s  resources, these researchers will dive … grasslands to the metabolic savviness of microbial ecosystems at the forest floor and along ocean shores. Their …
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Frederik Schulz
Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of novel … ecological roles of microeukaryotes in terrestrial ecosystems. Additionally, Dr. Schulz is leading a DTRA-funded … of metagenomic assembly and binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil …
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