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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental samples. The Science A … of microbes that play key roles in global biogeochemical cycles remains unexplored and uncultivated. Developing a …
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Plant Pan-Genomics Comes of Age
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired … interactions to functional genomics. Hear from five of the Summer 2019 interns, who briefly shared their … below. Name: Noelle Anderson Class Year: At the time of the internship, 4th year PhD student in Quantitative and …
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Computationally Classifying Fungal Lifestyles
… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that “taught” … to stress and host specificity, particularly regarding the effects of climate change. Summary A team led by researchers …
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, click and drag to look around the space, use the graphic rings to move about the space, and your …
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Rex Malmstrom
Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of SAR11 … genetic material, thus bypassing the need to culture these microbes in the lab. After joining the JGI, he formed the …
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Simon Roux
… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to identify virus sequences, … Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long …
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Natural Prodcast
… about natural products and the science and scientists of secondary metabolism. Natural products, secondary … research, “Natural Prodcast” serves as an important line of communication to the scientific community. Host Dan … future developments, and how the JGI can be part of that space.   …
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Robert Bowers
… uses single-cell genomics and metagenomics to explore how microbes influence people and the environment. This includes … studying the diversity, physiology and community ecology of microbes sampled from the natural environment. …
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Three Join the JGI User Executive Committee
… three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … the Ecological Society of America. He’s interested in how microbes influence biogeochemical cycles in soils and sediments and plant-microbial …
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Scientific Advisory Committee
JGI Director to provide a scientific and technical overview of the JGI. The SAC is chartered to render advice, guidance, … on the effective management and strategic objectives of the JGI. The SAC serves as the Institute's key external advisory panel and advocate of the Institute's strategy, operations, and scientific …
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the …
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