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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly … bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists … library and natural product discovery platform. WO2021163637A1 , PCT application PCT/US2021/018050 (published …
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10 From JGI on the 2019 Highly Cited Researchers List
… their 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused on Highly Cited Papers, defined in the Methodology section as “those that rank in the … (GSC), and the International Committee on Taxonomy of Viruses to outline the minimum amount of information for an …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … In this episode, Alison and I talk to Marnix Medema, from Wageningen University in the Netherlands. Marnix and his …
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Effects of Polar Light Cycle on Microbial Food Web
… change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the norm when it comes to … observations regarding the contributions of algae and viruses to the ecosystem were noted, but require further … 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about how the JGI supports the entire data life cycle through resources including the JGI portals, and our broader data ecosystem. …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes … The Science A team led by researchers at the Max Planck Institute (MPI) for Marine Microbiology has developed, … view of a population’s genetic makeup and identifying viruses interacting with these populations. Development of …
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Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
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Graduate Students Get Thesis Research Opportunity at the JGI
… Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab at … a remarkable opportunity to launch a pilot project and begin the work of understanding how engineered environments … of Texas-Austin. Rambo will be studying the influence of viruses on carbon cycling in coastal mangroves. The work …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and the Innovative Genomics Institute.  The Science Researchers … elements by incorporating short sequences from infecting viruses and phages. In the event of a new infection, the …
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Complete Genome Sequence of Rahnella aquatilis CIP 78.65
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used …
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