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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and giant … team mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …
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Graduate Students Get Thesis Research Opportunity at the JGI
… (SCGSR) program awards graduate students the opportunity to pursue part of their thesis research at one of the DOE … of Natural Sciences. “I’m deeply concerned about climate change and this is a remarkable opportunity to launch a pilot … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… below, captions are available) spotlighted the metabolomic analysis capability available through the  Community Science … JGI Metabolomics Program , along with Jenny Mortimer, Director of Plant Systems Biology at the Joint BioEnergy … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics … computing consultant, after completing a petascale postdoctoral fellowship at NERSC and LBNL’s Computational Research … on supercomputing hardware and worked closely with staff to understand the data-intensive nature of JGI workloads. Dr. …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to … shared by most living creatures for energy, growth and reproduction—most organisms produce a set of "secondary … in developing a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … that showcase our collaborations and capabilities to enable great science that will help solve energy and … species whose complex genomes are helping breeders understand how they can boost crop productivity and develop … biomass-based fuels.   … P. virgatum on Phytozome … Plant Dataset …
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Help from Citrus’ Bitter, Hardier Cousin
The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the … BGCs make diverse molecules of value to both human and ecosystem health. But bacteria often fail to express their …
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Frederik Schulz
Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research … Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine … ecological roles of microeukaryotes in terrestrial ecosystems. Additionally, Dr. Schulz is leading a …
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Toward More Efficient Artificial Photosynthesis
Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. … where photosynthesis takes place. The result: an integrated platform that mimics the photosynthetic process …
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Scaling Up Existing Skill Sets
… for bioinformatics internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … in research and JGI has been the perfect experience in understanding the requirements and responsibilities of being …
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