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Dan Rokhsar
… and evolutionary biology. Dr. Rokhsar’s research is focused on understanding the origin, evolution, and diversity … developmental biology. In addition to this evolutionary focus, his work on plant genomics is targeted towards the …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… (UC), Berkeley, UC Agriculture and Natural Resources (ANR), US Department of Agriculture P­­lant Gene Expression Center, … Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … its potential production of biomass on marginal lands not usable for conventional food crops. For that reason, its …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… microorganisms for biofuel production and other sustainable applications. Summary Hot springs are … A recent study published in  The ISME Journal     focused on a class within  Chloroflexota called  … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, has …
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Three Join the JGI User Executive Committee
The JGI User Executive Committee (UEC) recently welcomed three new … of California, Santa Barbara. They join eight other JGI users already serving on the UEC – go here to view the full … of members. Couvilion is a staff scientist at PNNL and thrust lead on PNNL’s Soil Microbiome SFA. She serves as …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… yield and climate resilience of algae — for potential use as biomass or in biomass conversion to biofuel. Summary … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … also opens new avenues for utilizing these organisms in sustainable practices, such as biofuel production and natural …
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Building on Experience, With a Twist?
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Graduate Students Get Thesis Research Opportunity at the JGI
… at one of the DOE national laboratories or national user facilities. As a result of the latest call , a total of … UC Merced School of Natural Sciences. “I’m deeply concerned about climate change and this is a remarkable opportunity to … how engineered environments contribute to greenhouse gases,” Kaze said. “It’s an exciting time in the field …
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Effects of Polar Light Cycle on Microbial Food Web
… scant, Ace Lake’s bacteria instead go through a boom and bust cycle aligned with light availability. A long-running … cycling takes place only on a microbial level. Previous studies focused on the Southern Ocean have found that in winter months, …
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A Natural Mechanism Can Turbocharge Viral Evolution
The Science The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” morphology, this means using proteins … acknowledge support from the EMERGE Institute (NSF #2022070). Sequencing of the Stordalen Mire samples used …
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Honey Bee Gut Microbiota Divvy Up Dinner
… of the National Academy of Sciences . The team focused on the dominant bacterial clades shared between honey … pollen’s pectin and hemicellulose are degraded mainly by just two clades:  Gilliamella,  which mostly resides in the bee’s ileum, a structure analogous to the human small intestine; and  Bifidobacterium,  …
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Accelerating Metagenomics Discoveries with Deep Learning
… (Berkeley Lab) and other institutions shared their works-in-progress with 86 participants in an online workshop to … workshop, Volkan Sevim, a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), … that low sequence identity may belie. The technology he’s using is magical; transform any length of amino acid …
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Busting the Unbreakable Lignin
The Impact Traditional methods for breaking down biomass use aerobic methods (those using oxygen) to remove lignin and transform the remaining … into  biofuels and bioproducts. If anaerobic fungi could be used to effectively modify lignin without oxygen and make …
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