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The Case for Conservation
… crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, … and seed yield. Conversely, some crops such as bioenergy sorghum may need sterile males; plant breeding experiments … HudsonAlpha. As the team discussed in a JGI podcast episode about the work, the effort to fully sequence the fire moss …
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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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Fungal Friends or Foes in Plant Roots
… fungi can form such symbiotic partnerships. To learn more about these other plant-fungal relationships, an … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The team then compared this dataset against nearly 80 previously published fungal genomes on the JGI data portal …
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Igor Grigoriev
… training at UC Berkeley and work in the pharmaceutical industry. He holds joint appointments as Fungal and Algal … geomics and PhycoCosm portal. Dr. Grigoriev engaged thousands of researchers in genome projects and organized numerous genomics workshops. … Algal Science Program Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and …
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Game On: High School Students Drive Everglades Metagenomics Study
… Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the … the next generation of scientists. She shares her thoughts about the experience below. In the summer of 2018, Jonathan … location because much is unknown about the diversity of organisms (taxonomy) and particularly those in processing …
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10 From JGI on the 2019 Highly Cited Researchers List
… includes 10 affiliated with the JGI . The 2019 list focused on Highly Cited Papers, defined in the Methodology … category Plant Program Library Construction Group Lead Jane Grimwood (at HudsonAlpha), Cross-Field category … gradient across the United States. Go here to learn more about the project . Igor Grigoriev and Asaf Salamov were …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … by the Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures GmbH, based in Braunschweig, … information as well as of important descriptive metadata about each strain. “This has been a very fruitful …
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JGI@25: Building a Better Bean
… may not seem to amount to much, the common bean (Phaseolus vulgaris) is actually a vital source of protein in many … of the JGI; and Scott Jackson of the University of Georgia sequenced and analyzed the genome of the common bean. … trait. Traditionally beans have had a shelf-life about roughly 6-9 months before their color begins to …
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Nikos Kyrpides
… at Argonne National Laboratory. Dr. Kyrpides’ research focus on Microbiome Research with an emphasis on Microbiome … S, et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . … Mol Cell . S1097-2765 Schulz F, et al. 2020. Giant virus diversity and host interactions through global …
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Digging into Microbial Ecosystems Deep Underground
… in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important role in the cycling of … these systems.” -Mike Wilkins, Colorado State University GI users and microbiome researchers Mike Wilkins and his … Amundson at Colorado State University have many questions about the microbial communities deep underground, and before …
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JGI@25: Stories from Intern Alumni
… JGI has hosted interns from a number of universities and organizations. From field research and wet lab experiments, …
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Novel and Emerging Capabilities that Can Provide a Holistic Understanding of the Plant Root Microbiome
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